Friday, 25 October 2019

The microbiomes of hungry perch


Microbes within the gut help with digestion, metabolism and defending against pathogens.  Fish are no exceptions when it comes to gut microbiomes however compared to humans, ruminants and arthropods they are relatively understudied.  In other organism’s stress has been shown to change gut microbial composition so Zha et al. (2018) set out to look at the changes in Eurasian perch, when predators are present and when food is scares. 

Fish were given varying quantities of food and were separated into tanks with the presence of predator behind a barrier or without.  The V4 region of the 16S rRNA was amplified from the entire intestine using PCR then sequenced and grouped into OUT’s of >97% similarity.

The presence of pike did not affect most of the microbes found but instead food stress was the important factor.  The microbes showing the most difference are Tenericutes and Fusobacteria with an increase and decrease respectively as food levels increase. This suggests that Fusobacteria may be used as an indicator for individuals under stress as they have significantly lower levels.  Further studies could look at the effect that Fusobacteria has on the individual and why levels decrease in times of food stress.

Zha, Y., Eiler, S., Johansson, F., Svanbak, R. (2018). Effects of predation stress and food ration on perch gut microbiota. Microbiome, 6.

No comments:

Post a Comment

Comments from external users are moderated before posting.

Note: only a member of this blog may post a comment.